In his current role, as a software engineer, he works with research teams to deliver high quality software. Connecting two or more power supplies in parallel figure 1 provides higher currents. The main aim of this paper is to design a scalable machine learning algorithm to scaleup and speedup clustering algorithm without losing its accuracy. This technique is simple, scalable, easily parallelized, and quite wellsuited to very large datasets. To optimize graph based power iteration for big data based. These two properties, small average distance and local clustering, are very di. Learn to connect power supplies in parallel for higher. Implementation of p pic algorithm in map reduce to. This embedding turns out to be an effective cluster indicator, consistently outperforming widely used spectral methods such as ncut on real datasets. Parallel power iteration clustering for big data using. It computes a pseudoeigenvector of the normalized affinity matrix of the graph via power iteration and.
Introduction clustering is the unsupervised classi. One popular modern clustering algorithm is power iteration clustering5. Though pic is fast and scalable it causes inter collision problem when dealing with larger datasets. Numerous new clustering algorithms have been introduced as a means to address these issues, for example densitybased methods e. Hierarchical clustering, has become increasingly popular in recent years as an effective strategy for tackling large scale data clustering problems. Our parallel clustering algorithm runs on the cluster computers environment. So parallel power iteration clustering was developed and due to its parallel implementation it. Inflated power iteration clustering algorithm to optimize. There are currently very few unsupervised machine learning algorithms available for use with large data set. Another term widely used for a power law graph is a scalefree network 2. Add power iteration clustering algorithm with gaussian similarity function. Additional project details registered 20121028 report inappropriate content.
Compared to traditional clustering algorithms, pic is simple, fast and relatively scalable. Power iteration is a very simple algorithm, but it may converge slowly. This section attempts to give an overview of cluster parallel processing using linux. Finally, some power law graphs also display the smallworld phenomenon, for example, the social network formed by individuals. Power iteration clustering is fast, efficient and scalable.
Pic replaces the eigen decomposition of the similarity matrix required by spectral clustering by a small number of matrixvector multiplications, which leads to a. A parallel implementation using openmp and c a parallel implementation using mpi and c a sequential version in c. Parallel netcdf an io library that supports data access to netcdf files in parallel. This chapter is devoted to building clusterstructured massively parallel processors. We focus on the design principles and assessment of the hardware, software. Both requires data matrix and similarity matrix to be fitting into the processors memory that is infeasible for very larger datasets. This paper proposes a parallel implement of kmeans clustering algorithm based on hadoop distributed file system and mapreduce distributed computing framework to deal this problem.
Cohen presentedby minhuachen outline power iteration method spectral clustering power iteration clustering result spectralclustering 1 given the data matrix x x1,x2,xnp. A parallel clustering algorithm for power big data. Using the exponential expansion of space in hyperbolic geometry, hyperbolic random graphs exhibit high clustering, a power law degree distribution with adjustable exponentn and natural hierarchy. Software engineer in the software and analytics organization at ge research, in niskayuna, ny. A parallel clustering algorithm for power big data analysis.
Pic takes an undirected graph with similarities defined on edges and outputs clustering assignment on nodes. It performs clustering by embedding data points in a. In this paper, we use mcl to refer to both the algorithm and its associated sharedmemory parallel software. Clusters are currently both the most popular and the most varied approach, ranging from a conventional network of workstations now to essentially custom parallel machines that just happen to use linux pcs as processor nodes. Parallel algorithms for hierarchical clustering sciencedirect. Java treeview is not part of the open source clustering software. Clustering result and the embedding provided by vt for the 3circles dataset. Power iteration clustering algorithm pic replaces the eigen values with pseudo eigen vector. Pic replaces the eigen decomposition of the similarity matrix required by spectral clustering by a small number of matrixvector multiplications, which leads to a great reduction in the computational complexities. Parallel computing on a cluster matlab answers matlab. The following table provides additional information on the members of this template class. Graph clustering algorithms are commonly used in the telecom industry for this purpose, and can be applied to data center management and operation. A starting point for applying clustering algorithms to unstructured document collections is to create a vector space model, alternatively known as a bagofwords. Netcdf a set of software libraries and selfdescribing, machineindependent data formats that support the creation, access, and sharing of arrayoriented scientific data.
The first one is the runtime of constructing the similarity matrix, and the second is the runtime of the clustering algorithm. Bowden wise is a computer scientist with over 14 years with the ge global research. Power iteration clustering pic power iteration clustering pic is a scalable and efficient algorithm for clustering vertices of a graph given pairwise similarities as edge properties, described in lin and cohen, power iteration clustering. This paper presents a new clustering algorithm, the gpic, a graphics processing unit gpu accelerated algorithm for power iteration. So parallel power iteration clustering was developed and due to its parallel implementation it reduces the memory storage.
Parallel clustering algorithms for image processing on multi. Keywordsclustering methods, hardware design, kmeans, parallel architectures, hardware folding i. Spectral clustering is computationally expensive unless the graph is sparse and the similarity matrix can be efficiently constructed. There is also a recent work on parallel kmeans by kantabutra and couch kc99. The p pic algorithm starts by the master processor determining the starting and ending indices for the corresponding data chunk for each processor and broadcasting the.
Clustering of computers enables scalable parallel and distributed computing in both science and business applications. Implementation of p pic algorithm in map reduce to handle. The drawbacks of the parallel computing architecture like fault tolerance, node. Machine learning uses these data to detect patterns and adjust program. Animation that visualizes the power iteration algorithm on a 2x2 matrix. There are hierarchical kmeans 7 parallel clustering 8, hierarchical mst 9, hierarchical meanshift 10, and hierarchical dbscan 11, to name a few. Power iteration clustering carnegie mellon school of. While mcl and tribemcl have been used extensively in clustering sequence similarity and other types of information, at a large scale, mcl becomes very demanding in terms of computational and memory requirements. There are several different forms of parallel computing. Cudabased parallelization of power iteration clustering for large. For large data support more than 2 billion number of data points, see this page for an mpi implementation that uses 8byte integers. Problem description clustering is the task of assigning a set of objects into groups called clusters so that the objects in the same cluster are more similar in some sense or another to each other than to those in other clusters.
Learn more about parfor, cluster, submat, matlab 2014a parallel computing toolbox. The main steps of power iteration clustering algorithm are described in fig 2. In addition, our parallel initialization gives an additional 1. The smallworld phenomenon can be interpreted as a power law distribution combined with a local clustering e. Enhancing mapreduce framework for bigdata with hierarchical. Iterative clustering of high dimensional text data augmented. Pic finds a very lowdimensional embedding of a dataset using truncated power iteration on a normalized pairwise similarity matrix of the data. One unit must operate in constant voltage cv mode and the others in constant current cc mode. Large problems can often be divided into smaller ones, which can then be solved at the same time.
Hardware implementation of the kmeans clustering algorithm. Their algorithm requires broadcasting the data set over the internet in each iteration, which causes a lot of network traffic and overhead. Power iteration clustering pic largescale extension to spectral clustering key idea. In addition to kmeans, bisecting kmeans and gaussian mixture, mllib provides implementations of three other clustering algorithms, power iteration clustering, latent dirichlet allocation and. Oison computer science department, comell university, ithaca, ny 14853, usa received 28 december 1993. Reported utilization of the computers by their algorithm is 50%. There are approximate algorithms for making spectral. Parallel clustering algorithm for largescale biological. Parallel computing is a type of computation in which many calculations or the execution of processes are carried out simultaneously.
An efficient implementation of chronic inflation based power. Clustering task is, however, computationally expensive as many of the algorithms require iterative or recursive procedures and most of reallife data is high dimensional. Assign each vectorintroduction clustering is a critical step in image processing and recognition. Therefore, the applications of parallel clustering algorithms and the clustering. Elsevier parallel computing parallel computing 21 1995 25 parallel algorithms for hierarchical clustering dark f. Clustering, section 3 contains existing system parallel power iteration clustering. Each cluster aims to consist of objects with similar features. Parallel power iteration clustering for big data request pdf. Introduction the progressive incorporation of data collection and communication abilities into consumer electronics is gradually transforming our society. It is an important tool for many fields including data mining, statistical data. Lin 3 develop power iteration method which uses matrix vector multiplication but still it is not good for large dataset and there was a memory issue. It computes a pseudoeigenvector of the normalized affinity matrix of the graph via power iteration and uses it to cluster vertices. The parallelism concept of mapreduce comes into picture. Wise has over 18 years of experience with ge and has indepth experience designing and developing solutions for ge businesses with focus on innovative technology solutions for the industrial internet.
To solve the optimal eigen value problem, in this paper we proposes an inflated power iteration clustering algorithm. Cluster object provides access to a cluster, which controls the job queue, and distributes tasks to workers for execution. Aug 08, 2014 the main steps of power iteration clustering algorithm are described in fig 2. We have implemented power iteration clustering pic in mllib, a simple and scalable graph clustering method described in lin and cohen, power iteration clustering. Algorithm design for ppic in mapreduce the algorithm discussed describes the procedure for implementing the parallel power iteration clustering using the hadoop mapreduce framework. Unit gpu accelerated algorithm for power iteration clustering pic. School of computer science, carnegie mellon university. In section 1, contains introduction, section 2, main method power iteration clustering, section 3 contains existing system parallel power iteration clustering. Parallel clustering algorithm for largescale biological data. Parallel clustering algorithms for image processing on. Pic provides an effective clustering indicator and outperform on real datasets with low dimensional data. In presenting pic, we make connections to and make. Parallel kmeans data clustering northwestern university. If the similarity matrix is an rbf kernel matrix, spectral clustering is expensive.
It has a better ability of handling larger datasets. More details and an illustration are provided in the architecture section below. How to effectively cope with the power network data is becoming a hot topic. Calculate the similarity matrix of the given graph. The values generated from storing and processing of big data cannot be analyzed using traditional computing techniques. Therefore, the parallelization of clustering algorithms is inevitable, and various parallel clustering algorithms have been implemented and applied to many applications. Power iteration clustering pic 6 is an algorithm that clusters data, using the power. Power iteration clustering is a scalable and efficient algorithm for clustering points given pointwise.
He has extensive experience in highperformance computing, parallel architectures and parallelization techniques. Scale up centerbased data clustering algorithms by. Points are distributed within a disk in the hyperbolic plane, a pair of points is connected if their hyperbolic distance is below a threshold. Networkit is distributed as a python package, ready to use interactively from a python shell, which is the. Introduction clustering or grouping document collections into conceptually meaningful clusters is a wellstudied problem. To view the clustering results generated by cluster 3. Power iteration clustering pic is a newly developed clustering algorithm. Plots b through d are rescaled so the largest value is always at the.
Keywords clustering methods, hardware design, kmeans, parallel architectures, hardware folding i. Overall flowchart for parallel implementation of power iteration clustering algorithm. Gilder is an associate professor of computer science at the college of saint rose. Normalize the calculated similarity matrix of the graph, wd1 a. We present a simple and scalable graph clustering method called power iteration clustering pic. A single source program includes host codes running on cpu. Wise has over 18 years of experience with ge and has indepth experience designing and developing solutions for ge businesses with focus on innovative. There are approximate algorithms for making spectral clustering more efficient. Hierarchical clustering offers several advantages over other clustering algorithms in that the number of clusters does not need to be specified in advance and the structure of the resulting dendrogram can offer insight into the larger structure of the data, e. Apr 21, 2016 power iteration clustering algorithm pic replaces the eigen values with pseudo eigen vector. Power iteration clustering a 3circles pic result b t 50, scale 0. Let x 1, x 2, x n be the n data points and p be the number of processors. Clustering using power iteration is fast and scalable.
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